openPrimeR Description
Package Documentation
Please take a look at the package vignette and manual to learn how openPrimeR can be used to analyze and design primer sets for multiplex PCR.
Shiny application
The openPrimeR Shiny application provides a user interface to the core functions of the package. The Shiny application is included with the R package where it can be started using the startApp() function. We also provide a stand-alone version of the Shiny application via a Docker container, which is available at Docker Hub.
Automatic report generation
openPrimeR can automatically create reports for evaluating one or multiple primer sets. We provide an example report for a single primer set and a report for comparing multiple primer sets targeting the IGH locus.