openPrimeR Description

Package Documentation

Please take a look at the package vignette and manual to learn how openPrimeR can be used to analyze and design primer sets for multiplex PCR.

Shiny application

The openPrimeR Shiny application provides a user interface to the core functions of the package. The Shiny application is included with the R package where it can be started using the startApp() function. We also provide a stand-alone version of the Shiny application via a Docker container, which is available at Docker Hub.

openPrimeR Shiny Application

Automatic report generation

openPrimeR can automatically create reports for evaluating one or multiple primer sets. We provide an example report for a single primer set and a report for comparing multiple primer sets targeting the IGH locus.